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A simple and elegant way to explore cancer data
A simple and elegant way to explore cancer data --- Public API proxied through Ozma. **Claim this listing** to monetize and manage pricing.
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| Method | Path | Summary | Price |
|---|---|---|---|
| GET | /Analyses/CopyNumber/Genes/All | Retrieve all data by genes Gistic2 results. | 1c |
| GET | /Analyses/CopyNumber/Genes/Amplified | Retrieve Gistic2 significantly amplified genes results. | 1c |
| GET | /Analyses/CopyNumber/Genes/Deleted | Retrieve Gistic2 significantly deleted genes results. | 1c |
| GET | /Analyses/CopyNumber/Genes/Focal | Retrieve focal data by genes Gistic2 results. | 1c |
| GET | /Analyses/CopyNumber/Genes/Thresholded | Retrieve all thresholded by genes Gistic2 results. | 1c |
| GET | /Analyses/FeatureTable | Retrieve aggregated analysis features table. | 1c |
| GET | /Analyses/Mutation/MAF | Retrieve MutSig final analysis MAF. | 1c |
| GET | /Analyses/Mutation/SMG | Retrieve Significantly Mutated Genes (SMG). | 1c |
| GET | /Analyses/Reports | Retrieve links to summary reports from Firehose analysis runs. | 1c |
| GET | /Analyses/mRNASeq/Quartiles | Returns RNASeq expression quartiles, e.g. suitable for drawing a boxplot. | 1c |
| GET | /Archives/StandardData | Retrieve standard data archives. | 1c |
| GET | /Metadata/Centers | Obtain identities of TCGA consortium member centers. | 1c |
| GET | /Metadata/ClinicalNames | Retrieve names of all TCGA clinical data elements (CDEs). | 1c |
| GET | /Metadata/ClinicalNames_FH | Retrieve names of CDEs normalized by Firehose and selected for analyses. | 1c |
| GET | /Metadata/Cohorts | Translate TCGA cohort abbreviations to full disease names. | 1c |
| GET | /Metadata/Counts | Retrieve sample counts. | 1c |
| GET | /Metadata/Dates | Retrieve dates of all GDAC Firehose stddata & analyses runs that have been ingested into FireBrowse. | 1c |
| GET | /Metadata/HeartBeat | Simple way to discern whether API server is up and running | 1c |
| GET | /Metadata/MAFColNames | Retrieve names of all columns in the mutation annotation files (MAFs) served by FireBrowse. | 1c |
| GET | /Metadata/Patients | Retrieve list of all TCGA patients. | 1c |
| GET | /Metadata/Platforms | Translate TCGA platform codes to full platform names. | 1c |
| GET | /Metadata/SampleType/Barcode/{TCGA_Barcode} | Given a TCGA barcode, return its short letter sample type code. | 1c |
| GET | /Metadata/SampleType/Code/{code} | Translate from numeric to symbolic TCGA sample codes. | 1c |
| GET | /Metadata/SampleType/ShortLetterCode/{short_letter_code} | Translate from symbolic to numeric TCGA sample codes. | 1c |
| GET | /Metadata/SampleTypes | Return all TCGA sample type codes, both numeric and symbolic. | 1c |
| GET | /Metadata/TSSites | Obtain identities of tissue source sites in TCGA. | 1c |
| GET | /Samples/Clinical | Retrieve TCGA CDEs verbatim, i.e. not normalized by Firehose. | 1c |
| GET | /Samples/Clinical_FH | Retrieve CDEs normalized by Firehose and selected for analyses. | 1c |
| GET | /Samples/mRNASeq | Retrieve mRNASeq data. | 1c |
| GET | /Samples/miRSeq | Retrieve miRSeq data. | 1c |
ozma register && ozma call firebrowse-beta-api /Analyses/CopyNumber/Genes/All --jsoncurl -H "Authorization: Bearer $OZMA_KEY" \
https://gateway.ozma.app/v1/proxy/firebrowse-beta-api/Analyses/CopyNumber/Genes/All# Python
client.proxy_call("firebrowse-beta-api", "/Analyses/CopyNumber/Genes/All")Own this API? Claim the listing to manage pricing and receive payouts.